Anatomeshr

Launch App Logo

Application

Name
Anatomeshr
Type
ShinyProxy App
URL
https://anatomeshr.serve.scilifelab.se
Source Code
https://github.com/SRobertGroup/Anatomeshr
Image
docker.io/heymansadrien/anatomeshr:0.0.6
Created
30 Apr, 2025
Updated
30 Apr, 2025
Tags
biomechanics, fem, gmsh

A converter of 2D plant anatomical data into finite element mesh (GEO) format.

Software

Type
Cloud Application
Operating System
Kubernetes
Version
ghcr.io/scilifelabdatacentre/serve-charts/shinyproxy:1.4.4

Resource

CPU Request
100m
CPU Limit
2000m
Memory Request
1Gi
Memory Limit
4Gi
Storage Request
100Mi
Storage Limit
5000Mi

Project

Name
Anatomeshr
Created
07 Apr, 2025

Many plant biologists are interested in understanding how turgor pressure and cell wall mechanical properties influence stress and strain patterns in 2D cellular arrangements. To support this, we developed a tool that converts 2D plant anatomical data from various sources into a Finite Element Model (BVPy). This tool facilitates transfer and retrieval of relevant information at each step of the modeling process.

Owner
Adrien Heymans
adrien.heymans@slu.se
Department of Forest Genetics and Plant Physiology
Sveriges lantbruksuniversitet (Swedish University of Agricultural Sciences)