shinyWGCNA

Launch App Logo

Application

Name
shinyWGCNA
Type
ShinyProxy App
URL
https://shinywgcna.serve.scilifelab.se
Source Code
https://github.com/JD2112/ShinyWGCNA
Image
jd21/shinywgcna:v1.1
Created
23 Jan, 2025
Updated
24 Jan, 2025
Tags
Shiny, co-expression-analysis, dna-methylation, rna-seq, wgcna

This Shiny app provides a user-friendly interface for performing Weighted Gene Co-expression Network Analysis (WGCNA) on RNA-seq/Microarray and DNA methylation (Array/Sequencing) data. It allows for data upload, parameter customization, visualization of results, and exporting of analysis outputs.

Software

Type
Cloud Application
Operating System
Kubernetes
Version
ghcr.io/scilifelabdatacentre/serve-charts/shinyproxy:1.4.3

Resource

CPU Request
500m
CPU Limit
2000m
Memory Request
1Gi
Memory Limit
4Gi
Storage Request
100Mi
Storage Limit
5000Mi

Project

Name
ShinyWGCNA
Created
22 Jan, 2025

A Shiny app to perform Weight Gene Co-expression Network Analysis from the RNAseq and the DNA methylation data.

Owner
Jyotirmoy Das
jyotirmoy.das@liu.se
Department of Biomedical and Clinical Sciences
Linköpings universitet (Linköping University)