BridgeDb: framework to map identifiers between various biological databases

Launch App Logo

Application

Name
BridgeDb: framework to map identifiers between various biological databases
Type
Custom App
URL
https://bridgedb.serve.scilifelab.se
Source Code
Image
akochari/bridgedb:v3
Created
08 Jan, 2024
Updated
08 Jan, 2024
Tags

The mappings are provided for genes, proteins, metabolites, metabolic reactions, diseases, complexes and publications. This is a REST service for programmatic access to BridgeDb content, provided with interactive Swagger documentation using OpenAPI. For more info see https://www.bridgedb.org/.

Software

Type
Cloud Application
Operating System
Kubernetes
Version
ghcr.io/scilifelabdatacentre/serve-charts/custom-app:1.0.1

Resource

CPU Request
500m
CPU Limit
2000m
Memory Request
1Gi
Memory Limit
4Gi
Storage Request
100Mi
Storage Limit
5000Mi

Project

Name
VHP4Safety
Created
08 Jan, 2024

Owner
Arnold Kochari
arnold.kochari@scilifelab.uu.se
Institute for Genetics, Immunology, and Pathology
Uppsala universitet (Uppsala University)
Download All Metadata (JSON)

SciLifeLab Serve (beta) is developed and operated by the SciLifeLab Data Centre. SciLifeLab Serve is free to use for all life science researchers affiliated with a Swedish research institution and their collaborators. The service is hosted on a Kubernetes cluster. The code behind SciLifeLab Serve is available on Github.

Please email serve@scilifelab.se with any questions.

version 2025-06-18 (v3.2.1-beta)

Supported by:

SciLifeLab
Swedish Foundation for Strategic Research
Knut and Alice Wallenberg Foundation