Application
- Name
- SHAMSUL
- Type
- Gradio App
- URL
- https://shamsul.serve.scilifelab.se
- Source Code
- https://github.com/anondo1969/SHAMSUL
- Image
- mahbub1969/shamsul:v6
- Created
- 09 Jan, 2025
- Updated
- 19 Feb, 2025
- Tags
- "chest x-ray", "clinical decision support system", "deep learning", "heatmap score visualization", "interpretability methods", grad-cam, lime, lrp, shap
Explores interpretability for chest X-ray pathology predictions using methods—Grad-CAM, LIME, SHAP, and LRP. It provides heatmaps and evaluation metrics for better insights into the medical significance of predictions made by deep learning models.
Software
- Type
- Cloud Application
- Operating System
- Kubernetes
- Version
- ghcr.io/scilifelabdatacentre/serve-charts/custom-app:1.1.1
Resource
Project
- Name
- Mahbub's_Apps
- Created
- 13 Dec, 2024
The interpretability of deep neural networks has become a subject of great interest within the medical and healthcare domain. This attention stems from concerns regarding transparency, legal and ethical considerations, and the medical significance of predictions generated by these deep neural networks in clinical decision support systems. To address this matter, our study delves into the application of four well-established interpretability methods: Local Interpretable Model-agnostic Explanations (LIME), Shapley Additive exPlanations (SHAP), Gradient-weighted Class Activation Mapping (Grad-CAM), and Layer-wise Relevance Propagation (LRP). Leveraging the approach of transfer learning with a multi-label-multi-class chest radiography dataset, we aim to interpret predictions pertaining to specific pathology classes. Our analysis encompasses both single-label and multi-label predictions, providing a comprehensive and unbiased assessment through quantitative and qualitative investigations, which are compared against human expert annotation. Notably, Grad-CAM demonstrates the most favorable performance in quantitative evaluation, while the LIME heatmap score segmentation visualization exhibits the highest level of medical significance. Our research underscores both the outcomes and the challenges faced in the holistic approach adopted for assessing these interpretability methods and suggests that a multimodal-based approach, incorporating diverse sources of information beyond chest radiography images, could offer additional insights for enhancing interpretability in the medical domain.
