Application

Title

CAPIM-APP

Type

Streamlit App

URL

https://capim-app.serve.scilifelab.se

Source code

https://git.chalmers.se/ozsari/capim-app

Docker image

gozsari/capim-app:Serve0.1

Created

23 Jun, 2025

Updated

13 Sep, 2025

Description

CAPIM is an integrative computational pipeline for identifying and characterizing catalytic sites in proteins. It combines enzymatic activity prediction, pocket detection, and ligand docking simulations to determine active residues and annotate them with Enzyme Commission (EC) numbers computationally. CAPIM supports multi-chain protein structures, making it suitable for comprehensive enzymatic analysis in complex biological systems.

Subjects & keywords

Catalytic Domain

Binding Sites

Catalysis

Molecular Docking Simulation

Enzyme

Machine Learning