SixPack-AbScan: predict crossreactivity of monoclonal antibodies on non-target species

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Title: SixPack-AbScan: predict crossreactivity of monoclonal antibodies on non-target species
DOI: https://doi.org/10.82595/scilifelab.5w4ys-c5j18
Description: Given either: a nucleotide FASTA (genome/transcriptome), or a precomputed protein FASTA, and a table of epitope peptide sequences, the tool: Optionally generates a 6-frame translation (3 forward + 3 reverse-complement frames). Scans translated/protein sequences for exact epitope matches. Writes hit tables for downstream analysis. .
URL: https://sixpack-abscan.serve.scilifelab.se
Source code: https://github.com/mgcizzu/SixPack-AbScan
Docker image: ghcr.io/mgcizzu/sixpack-abscan:sha-2d06085
Date submitted: 2026-03-12 09:54
Date updated: 2026-06-09 06:46
Date available: 2026-04-13 11:44
Language: English

Grillo, Marco

Version 1:
https://doi.org/10.82595/scilifelab.5w4ys-c5j18 current

To cite all versions, use the following DOI:
https://doi.org/10.82595/scilifelab.34k8e-6fr80