SixPack-AbScan: predict crossreactivity of monoclonal antibodies on non-target species

Record description

Title: SixPack-AbScan: predict crossreactivity of monoclonal antibodies on non-target species
DOI: https://doi.org/10.82595/scilifelab.94h4j-nvg03
Description: Given either: a nucleotide FASTA (genome/transcriptome), or a precomputed protein FASTA, and a table of epitope peptide sequences, the tool: Optionally generates a 6-frame translation (3 forward + 3 reverse-complement frames). Scans translated/protein sequences for exact epitope matches. Writes hit tables for downstream analysis. .
URL: https://sixpack-abscan.serve.scilifelab.se
Source code: https://github.com/mgcizzu/SixPack-AbScan
Docker image: ghcr.io/mgcizzu/sixpack-abscan:sha-814b284
Date submitted: 2026-03-12 09:54
Date updated: 2026-08-18 15:50
Date available: 2026-04-13 11:44
Language: English