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SpatialCurve

Version 4 (see latest version)

Record description

Title
SpatialCurve
DOI
https://doi.org/10.82595/scilifelab.d12mc-h0p42
Description
Upload a HistoSeg contour bundle and a Xenium transcript.parquet file, choose one or more structures, compute inward and outward transcript distance curves around the selected contour, and rank the most spatially variant genes.
URL
https://spatialcurve-evb.serve.scilifelab.se
Source code
https://github.com/longmp1992/histoseg-contour-transcript-serve
Docker image
ghcr.io/longmp1992/histoseg-contour-transcript-serve:sha-68a3fbe
Date submitted
2026-08-26 12:31
Date updated
2026-08-27 10:44
Date available
2026-08-26 12:31
Language
English