Skip to main content

SpatialCurve

Version 2 (see latest version)

Record description

Title
SpatialCurve
DOI
https://doi.org/10.82595/scilifelab.k78ds-mb586
Description
Upload a HistoSeg contour bundle and a Xenium transcript.parquet file, choose one or more structures, compute inward and outward transcript distance curves around the selected contour, and rank the most spatially variant genes.
URL
https://spatialcurve-evb.serve.scilifelab.se
Source code
https://github.com/longmp1992/histoseg-contour-transcript-serve
Docker image
ghcr.io/longmp1992/histoseg-contour-transcript-serve:sha-71f7bb4
Date submitted
2026-08-26 12:31
Date updated
2026-08-26 13:35
Date available
2026-08-26 12:31
Language
English